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SRX18291135: 16S metagenomic analysis of rhizosphere soil : alfalfa (Medicago genetic lines)
1 ILLUMINA (Illumina MiSeq) run: 40,214 spots, 24.2M bases, 17.7Mb downloads

Design: 16S metagenomic sequencing library preparation with Nextera XT v2 index kit as recommended by Illumina (part # 15044223 Rev. B)
Submitted by: Agricultural Research Institute
Study: Phylogenetic analysis of rhizosphere-associated bacteria of different alfalfa genetic lines
show Abstracthide Abstract
Alfalfa (Medicago sativa L.) a herbaceous legume, is perhaps one of the most economically important crops as it provides excellent quality livestock feed. Understanding, how alfalfa-associated rhizosphere-associated bacterial (RAB) communities work towards high-yield crops in agriculturally relevant conditions, a broad analysis is needed utilizing a variety of alfalfa species preferentially in a natural setting. In this study, we phylogenetically compared the RAB communities (16S rRNA gene) associated with the rhizosphere of four field-grown alfalfa lines.
Sample: rhizosphere soil of M. sativa ssp. sativa
SAMN31762863 • SRS15782721 • All experiments • All runs
Library:
Name: S174
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 40,214 spots, 24.2M bases, 17.7Mb
Run# of Spots# of BasesSizePublished
SRR2231783440,21424.2M17.7Mb2024-12-20

ID:
25301579

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